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RESULTS OF WHOLE EXOME SEQUENCING IN NEONATES WITH NEONATAL ENCEPHALOPATHY

https://doi.org/10.52485/19986173_2026_2_82

Abstract

Objective: to assess the detection rate of monogenic disorders in neonates with encephalopathy using whole-exome sequencing.

Materials and Methods. A cohort descriptive study was conducted at the Ural Research Institute for Maternal and Child Health in 2024–2025. Whole-exome sequencing (WES) results from 41 neonates with neonatal encephalopathy (NE) at a gestational age greater than 28 weeks were analyzed. The phenotype was characterized using "major" and "minor" risk criteria for genetic pathology. Congenital malformations were identified in 11 (27%) infants.

Results: Genetic variants of varying significance were detected in 7 (17,07%) children included in the study, in 8 genes (PRD1, DNAH5, DOCK7, SDHA, SLC45A2, RS1, KMT2D, TUBA1A). An association of the finding with the clinical phenotype was confirmed in 75% of cases. In 3 (37,5%) patients, the variants were classified as having uncertain clinical significance. In full-term newborns, the frequency of findings was 22,58%, while in premature infants, no significant variants were identified. In children with congenital malformations, the effectiveness of WES was 36,36% versus 10% in those without congenital malformations (p = 0,069).

Conclusion. WES is an effective method for identifying the genetic causes of NE, especially in full-term newborns and in combination with congenital malformations. Timely genetic diagnosis is important for clarifying the prognosis for life and health, personalizing treatment.

About the Authors

E. V. Kudryavtseva
Federal State Budgetary Institution “Ural Research Institute for Maternal and Infant Protection” of the Ministry of Health of the Russian Federation
Russian Federation

Elena V. Kudryavtseva, Doctor of Medical Sciences, Associate Professor, Leading researcher of the Department of Reproductive Function Preservation 

1 Repin St., Ekaterinburg, Russia 620028



T. B. Tretyakova
Federal State Budgetary Institution “Ural Research Institute for Maternal and Infant Protection” of the Ministry of Health of the Russian Federation
Russian Federation

Tatyana B. Tretyakova, Candidate of Medical Sciences, Senior researcher of the Department of Biochemical Research Methods, Head of the Genetics Laboratory 

1 Repin St., Ekaterinburg, Russia 620028



S. Yu. Zakharova
Federal State Budgetary Institution “Ural Research Institute for Maternal and Infant Protection” of the Ministry of Health of the Russian Federation
Russian Federation

Svetlana Yu. Zakharova, Doctor of Medical Sciences, Professor, Leading Researcher of the Department of Physiology and Pathology of Newborns and Young Children 

1 Repin St., Ekaterinburg, Russia 620028



S. V. Kinzhalova
Federal State Budgetary Institution “Ural Research Institute for Maternal and Infant Protection” of the Ministry of Health of the Russian Federation
Russian Federation

Svetlana V. Kinzhalova, Doctor of Medical Sciences, Associate Professor, Head of the Scientific Department of Intensive Care and Resuscitation 

1 Repin St., Ekaterinburg, Russia 620028



A. E. Sokolova
Federal State Budgetary Institution “Ural Research Institute for Maternal and Infant Protection” of the Ministry of Health of the Russian Federation
Russian Federation

Anastasia E. Sokolova, Neonatologist of the Department of Newborns and Premature Infants, Full-time Postgraduate Student 

1 Repin St., Ekaterinburg, Russia 620028



A. I. Gaeva
Federal State Budgetary Institution “Ural Research Institute for Maternal and Infant Protection” of the Ministry of Health of the Russian Federation
Russian Federation

Aleksandra I. Gaeva, Deputy Director for Pediatric Work 

1 Repin St., Ekaterinburg, Russia 620028



References

1. Bruun T.U.J., DesRoches C.L., Wilson D., Chau V., Nakagawa T., et al. Prospective cohort study for identification of underlying genetic causes in neonatal encephalopathy using whole-exome sequencing. Genetics in Medicine. 2018 Apr.; 20 (5): 486–494. DOI: 10.1038/gim.2017.129.

2. Ambrose A., McNiven V., Wilson D., Tempes A., Underwood M., et al. Neonatal Encephalopathy: Novel Phenotypes and Genotypes Identified by Genome Sequencing. Neurology. Genetics. 2025. Jan. 13; 11 (1): e200232. DOI: 10.1212/NXG.0000000000200232.

3. Dokshukina A.A., Shubina E., Pavlova N.S., Tolmacheva E.R., Maslennikov D.N., et al. Pilot regional project using selective exome screening of newborns: first results. Neonatology: News, Opinions, Training. 2025; 13 (2): 33–44. https://doi.org/10.33029/2308-2402-2025-13-2-33-44. (in Russian).

4. Pomerantseva E.A., Dokshukina A.A., Degtyareva A.V., Maslennikov D.N., Trofimov D.Yu., Degtyarev D.N. Criteria of phenotype assessment of newborn for the group formation with increased risk of genetic diseases. Neonatologiya: novosti, mneniya, obuchenie. Neonatology: News, Opinions, Training. 2022; 10 (4): 47–53. https://doi.org/10.33029/2308-2402-2022-10-4-47-53. (in Russian).

5. Bogonosova G.P., Bugun O.V., Ionushene S.V., Astakhova T.A., Golobkova I.M., et al. Interim results of selective screening using whole exome sequencing in newborns. Acta biomedical scientifica. 2025; 10 (1): 69–76. DOI: 10.29413/ABS.2025-10.1.7 (in Russian).

6. Donn S.M., Chiswick M.L., Fanaroff J.M. Medico-legal implications of hypoxic-ischemic birth injury. Seminars in Fetal and Neonatal Medicine. 2014. Oct.; 19 (5): 317–21. DOI: doi:10.1016/j.siny.2014.08.005.

7. Kravchenko E.N., Serov V.N., Baev O.R. Risk Factors for Birth Trauma. Obstetrics and Gynecology. https://doi.org/10.18565/aig.2022.9.5-10. (in Russian).


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For citations:


Kudryavtseva E.V., Tretyakova T.B., Zakharova S.Yu., Kinzhalova S.V., Sokolova A.E., Gaeva A.I. RESULTS OF WHOLE EXOME SEQUENCING IN NEONATES WITH NEONATAL ENCEPHALOPATHY. Transbaikalian Medical Bulletin. 2026;(2):82-89. (In Russ.) https://doi.org/10.52485/19986173_2026_2_82

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ISSN 1998-6173 (Online)